Wah Heng Lee

Summary

Country: Singapore

Publications

  1. ncbi Optimization and clinical validation of a pathogen detection microarray
    Christopher W Wong
    Genomic Technologies, Genome Institute of Singapore, Republic of Singapore
    Genome Biol 8:R93. 2007
  2. ncbi Mutational dynamics of the SARS coronavirus in cell culture and human populations isolated in 2003
    Vinsensius B Vega
    Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672
    BMC Infect Dis 4:32. 2004
  3. ncbi LOMA: a fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens
    Wah Heng Lee
    Genome Institute of Singapore, Genome, Singapore
    BMC Bioinformatics 9:368. 2008
  4. ncbi RB-finder: an improved distance-based sliding window method to detect recombination breakpoints
    Wah Heng Lee
    Genome Institute of Singapore and School of Computing, National University of Singapore, Singapore, Singapore
    J Comput Biol 15:881-98. 2008
  5. ncbi Heterogeneity detector: finding heterogeneous positions in Phred/Phrap assemblies
    W H Lee
    Genome Institute of Singapore, Information and Mathematical Sciences, Singapore, 138672, Singapore
    Bioinformatics 20:2863-4. 2004
  6. ncbi Fast and accurate probe selection algorithm for large genomes
    Wing Kin Sung
    Department of Computer Science, National University of Singapore, Singapore
    Proc IEEE Comput Soc Bioinform Conf 2:65-74. 2003
  7. ncbi Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes
    Axel M Hillmer
    Genome Technology and Biology, Genome Institute of Singapore, Singapore 138672, Singapore
    Genome Res 21:665-75. 2011
  8. ncbi DREAM2 challenge
    W H Lee
    Department of Computer Science, National University of Singapore, Singapore
    Ann N Y Acad Sci 1158:196-204. 2009
  9. ncbi Human endogenous retrovirus HERV-W family: chromosomal localization, identification, and phylogeny
    H S Kim
    Division of Biological Sciences, College of Natural Sciences, Pusan National University, Pusan 609 735, South Korea
    AIDS Res Hum Retroviruses 17:643-8. 2001
  10. ncbi Molecular models of the procoagulant factor VIIIa-factor IXa complex
    L Autin
    INSERM U648, Paris 5 University, 4 Ave de l Observatoire, Paris, France
    J Thromb Haemost 3:2044-56. 2005

Collaborators

Detail Information

Publications25

  1. ncbi Optimization and clinical validation of a pathogen detection microarray
    Christopher W Wong
    Genomic Technologies, Genome Institute of Singapore, Republic of Singapore
    Genome Biol 8:R93. 2007
    ..Our findings show that microarrays can be used for the robust and accurate diagnosis of pathogens, and further substantiate the use of microarray technology in clinical diagnostics...
  2. ncbi Mutational dynamics of the SARS coronavirus in cell culture and human populations isolated in 2003
    Vinsensius B Vega
    Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672
    BMC Infect Dis 4:32. 2004
    ..The recent emergence of this new pathogen, the careful tracing of its transmission patterns, and the ability to propagate in culture allows the exploration of the mutational dynamics of the SARS-CoV in human populations...
  3. ncbi LOMA: a fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens
    Wah Heng Lee
    Genome Institute of Singapore, Genome, Singapore
    BMC Bioinformatics 9:368. 2008
    ....
  4. ncbi RB-finder: an improved distance-based sliding window method to detect recombination breakpoints
    Wah Heng Lee
    Genome Institute of Singapore and School of Computing, National University of Singapore, Singapore, Singapore
    J Comput Biol 15:881-98. 2008
    ..We also show how our method has potential use in other related applications such as genotyping...
  5. ncbi Heterogeneity detector: finding heterogeneous positions in Phred/Phrap assemblies
    W H Lee
    Genome Institute of Singapore, Information and Mathematical Sciences, Singapore, 138672, Singapore
    Bioinformatics 20:2863-4. 2004
    ..AVAILABILITY: The package is made available at http://glscompute.gis.a-star.edu.sg/~charlie/DHetero.html..
  6. ncbi Fast and accurate probe selection algorithm for large genomes
    Wing Kin Sung
    Department of Computer Science, National University of Singapore, Singapore
    Proc IEEE Comput Soc Bioinform Conf 2:65-74. 2003
    ..Based on the new algorithm, optimal short (20 bases) or long (50 or 70 bases) probes can be computed efficiently for large genomes...
  7. ncbi Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes
    Axel M Hillmer
    Genome Technology and Biology, Genome Institute of Singapore, Singapore 138672, Singapore
    Genome Res 21:665-75. 2011
    ....
  8. ncbi DREAM2 challenge
    W H Lee
    Department of Computer Science, National University of Singapore, Singapore
    Ann N Y Acad Sci 1158:196-204. 2009
    ..Using this approach, we are able to identify BCL6 targets with high accuracy, making us joint best performers of the challenge...
  9. ncbi Human endogenous retrovirus HERV-W family: chromosomal localization, identification, and phylogeny
    H S Kim
    Division of Biological Sciences, College of Natural Sciences, Pusan National University, Pusan 609 735, South Korea
    AIDS Res Hum Retroviruses 17:643-8. 2001
    ..In group IV, a clone (W-12-2) on chromosome 12 shared 100% sequence identity with a clone (W-17-5) on chromosome 17, suggesting either a retrotransposition or a chromosomal translocation in the last 2 to 5 million years...
  10. ncbi Molecular models of the procoagulant factor VIIIa-factor IXa complex
    L Autin
    INSERM U648, Paris 5 University, 4 Ave de l Observatoire, Paris, France
    J Thromb Haemost 3:2044-56. 2005
    ..The physiological relevance of the tenase complex is evident in hemophilia A or B patients who present with bleeding disorders...
  11. ncbi Methods and evaluations of MRI content-adaptive finite element mesh generation for bioelectromagnetic problems
    W H Lee
    Department of Biomedical Engineering, Kyung Hee University, Korea
    Phys Med Biol 51:6173-86. 2006
    ..The results show that there is a significant gain in computation time with minor loss in numerical accuracy. We believe that cMeshes should be useful in the FEA of bioelectromagnetic problems...
  12. ncbi Extraction and localization of alpha activity of the brain in EEG and fMRI using constrained ICA
    S H Ahn
    Department of Biomedical Engineering, Kyung Hee University, Yongin, Gyeonggi, Republic of Korea
    Conf Proc IEEE Eng Med Biol Soc 2007:5493-6. 2007
    ..The use of cICA might provide a more effective means of extracting EEG alpha activity of the brain...
  13. ncbi Color image detection by biomolecular photoreceptor using bacteriorhodopsin-based complex LB films
    H G Choi
    Department of Chemical Engineering, Sogang University, CPO Box 1142, Seoul 100 611, Republic of Korea
    Biosens Bioelectron 16:925-35. 2001
    ..It is concluded that the proposed device has a capability of recognizing the color images and can be used as a model system to simulate the information processing function of the human visual system...
  14. ncbi Cloning of cDNAs encoding C-type lectins from Elapidae snakes Bungarus fasciatus and Bungarus multicinctus
    H G Zha
    Kunming Institute of Zoology, Chinese Academy of Sciences, 32 East JiaoChang Road, Kunming, Yunnan 650223, China
    Toxicon 39:1887-92. 2001
    ..To our knowledge, these are the first cDNA cloning of group VII C-type lectins (Drickamer K. 1993. Prog. Nucleic Acid Res. Mol. Biol. 45, 207-232) from Elapidae snake venom glands...
  15. ncbi Association of human Pur alpha with the retinoblastoma protein, Rb, regulates binding to the single-stranded DNA Pur alpha recognition element
    E M Johnson
    Department of Pathology, Mount Sinai School of Medicine, New York, New York 10029, USA
    J Biol Chem 270:24352-60. 1995
    ..Binding of Pur alpha to p56RB, the COOH-terminal portion of Rb, is inhibited by a synthetic peptide containing the T-antigen Rb-binding motif...
  16. ncbi Characterization of a novel 350-kilodalton nuclear phosphoprotein that is specifically involved in mitotic-phase progression
    X Zhu
    Center for Molecular Medicine, University of Texas Health Science Center at San Antonio 78245, USA
    Mol Cell Biol 15:5017-29. 1995
    ..Overexpression of N-terminally truncated mutants blocks cell cycle progression mainly at G2/M. These results suggest that mitosin may play an important role in mitotic-phase progression...
  17. ncbi Identification of a human homologue of yeast nuc2 which interacts with the retinoblastoma protein in a specific manner
    P L Chen
    Center for Molecular Medicine Institute of Biotechnology, University of Texas Health Science Center at San Antonio 78245, USA
    Cell Growth Differ 6:199-210. 1995
    ..In contrast to wild-type H-NUC, the mutant was temperature sensitive in binding to Rb protein. These results, taken together, suggest that the interaction between H-NUC and Rb may be significant...
  18. ncbi A new member of the hsp90 family of molecular chaperones interacts with the retinoblastoma protein during mitosis and after heat shock
    C F Chen
    Center for Molecular Medicine, Institute of Biotechnology, University of Texas Health Science Center at San Antonio 78245, USA
    Mol Cell Biol 16:4691-9. 1996
    ..The discovery of a heat shock protein that chaperones Rb identifies a mechanism, in addition to phosphorylation, by which Rb is regulated in response to progression of the cell cycle and to external stimuli...
  19. ncbi A thyroid hormone receptor coactivator negatively regulated by the retinoblastoma protein
    K H Chang
    Department of Molecular Medicine and Institute of Biotechnology, University of Texas Health Science Center at San Antonio, 15355 Lambda Drive, San Antonio, TX 78245, USA
    Proc Natl Acad Sci U S A 94:9040-5. 1997
    ..These results not only identify a coactivator molecule that modulates TR activity, but also uncover a role for Rb in a pathway that responds to thyroid hormone...
  20. ncbi HEC, a novel nuclear protein rich in leucine heptad repeats specifically involved in mitosis
    Y Chen
    Department of Molecular Medicine, Institute of Biotechnology, University of Texas Health Science Center at San Antonio, 78245, USA
    Mol Cell Biol 17:6049-56. 1997
    ..These results suggest that the HEC protein may play an important role in chromosome segregation during M phase...
  21. ncbi Identification of a novel cytoplasmic protein that specifically binds to nuclear localization signal motifs
    S Li
    Department of Molecular Medicine and Institute of Biotechnology, The University of Texas Health Science Center, San Antonio, Texas 78245 3207, USA
    J Biol Chem 273:6183-9. 1998
    ..Similarly, the yeast homolog of BRAP2 also binds to these NLS motifs in vitro. These results imply that BRAP2 may function as a cytoplasmic retention protein and play a role in regulating transport of nuclear proteins...
  22. ncbi Hec1p, an evolutionarily conserved coiled-coil protein, modulates chromosome segregation through interaction with SMC proteins
    L Zheng
    Department of Molecular Medicine, Institute of Biotechnology, University of Texas Health Science Center San Antonio, San Antonio, Texas 78245, USA
    Mol Cell Biol 19:5417-28. 1999
    ..These results suggest that Hec1 proteins play a critical role in modulating chromosomal segregation, in part, through their interactions with SMC proteins...
  23. ncbi Sequence-specific transcriptional corepressor function for BRCA1 through a novel zinc finger protein, ZBRK1
    L Zheng
    Department of Molecular Medicine, Institute of Biotechnology, University of Texas Health Science Center at San Antonio, 78245, USA
    Mol Cell 6:757-68. 2000
    ..These results thus reveal a novel corepressor function for BRCA1 and provide a mechanistic basis for the biological activity of BRCA1 through sequence-specific transcriptional regulation...
  24. ncbi High prevalence of VanB2 vancomycin-resistant Enterococcus faecium in Taiwan
    J J Lu
    Division of Clinical Pathology and Experimental Pathology, Department of Pathology, Tri Service General Hospital and National Defense Medical Center, No 325, Section 2, ChengKung Rd, Taipei 114, Taiwan, Republic of China
    J Clin Microbiol 39:2140-5. 2001
    ..This result suggests that intra- and interhospital dissemination of this E. faecium strain has occurred in Taiwan...
  25. ncbi Human esterase D gene: complete cDNA sequence, genomic structure, and application in the genetic diagnosis of human retinoblastoma
    L J Young
    Department of Pathology, School of Medicine, University of California at San Diego, La Jolla 92093
    Hum Genet 79:137-41. 1988
    ..A polymorphic site for Apa I, located within an intron of the esterase D gene, can be used to identify chromosome 13 carrying defective RB alleles within retinoblastoma families...