Research Topics
Genomes and Genes | Thomas N WilliamsSummaryAffiliation: Kenya Medical Research Institute Country: Kenya Publications
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Publications
Validating physician-certified verbal autopsy and probabilistic modeling (InterVA) approaches to verbal autopsy interpretation using hospital causes of adult deathsEvasius Bauni
Department of Epidemiology and Demography, KEMRI Wellcome Trust Research Programme, PO Box 230 Kilifi 80108, Kenya
Popul Health Metr 9:49. 2011..abstract:..
Social autopsy: INDEPTH Network experiences of utility, process, practices, and challenges in investigating causes and contributors to mortalityKarin Kallander
Department of Health Policy, Planning and Management, School of Public Health, Makerere University, P, O, Box 7072, Kampala, Uganda
Popul Health Metr 9:44. 2011..abstract:..
Geographic access to care is not a determinant of child mortality in a rural Kenyan setting with high health facility densityJennifer C Moïsi
Department of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA
BMC Public Health 10:142. 2010..Distance to health facilities is a known determinant of health care utilization and may drive inequalities in health outcomes; we aimed to investigate its effects on childhood mortality...
Parvovirus B19 infection and severe anaemia in Kenyan children: a retrospective case control studyJames Wildig
Department of Infectious Diseases and Immunology, University of Sydney, Australia
BMC Infect Dis 10:88. 2010..This retrospective case/control study seeks to ascertain the proportion of severe anaemia cases precipitated by B19 among young children admitted to a Kenyan district hospital...
Bacteraemia in Kenyan children with sickle-cell anaemia: a retrospective cohort and case-control studyThomas N Williams
Centre for Geographic Medicine Research Coast, Kilifi, Kenya
Lancet 374:1364-70. 2009..The causes of death are poorly documented, but bacterial sepsis is probably important. We examined the risk of invasive bacterial diseases in children with sickle-cell anaemia...
Sickle cell disease and malaria morbidity: a tale with two tailsThomas N Williams
KEMRI Centre for Geographic Medicine Research Coast, Kilifi, Kenya
Trends Parasitol 27:315-20. 2011..In the absence of definitive studies investigating the contribution of malaria to morbidity and mortality in African children with SCD, policy makers will continue to lack the evidence on which to base appropriate management guidelines...
Human genetic resistance to malariaThomas N Williams
University of Oxford, Department of Paediatrics, Oxford Radcliffe NHS Trust, Oxford, UK
Adv Exp Med Biol 634:243-53. 2009..The stage is set for a giant leap forward in the coming years...
Negative epistasis between the malaria-protective effects of alpha+-thalassemia and the sickle cell traitThomas N Williams
Kenya Medical Research Institute Wellcome Trust Programme, Centre for Geographic Medicine Research, Coast, PO Box 230, Kilifi District Hospital, Kilifi, Kenya
Nat Genet 37:1253-7. 2005..Negative epistasis could explain the failure of alpha(+)-thalassemia to reach fixation in any population in sub-Saharan Africa...
The effect of alpha+-thalassaemia on the incidence of malaria and other diseases in children living on the coast of KenyaSammy Wambua
Kenya Medical Research Institute/Wellcome Trust Programme, Centre for Geographic Medicine Research Coast, Kilifi District Hospital, Kilifi, Kenya
PLoS Med 3:e158. 2006....
The haptoglobin 2-2 genotype is associated with a reduced incidence of Plasmodium falciparum malaria in children on the coast of KenyaSarah H Atkinson
KEMRI Wellcome Trust Programme, Centre of Geographic Medicine Research, Kilifi District Hospital, Kilifi, Kenya
Clin Infect Dis 44:802-9. 2007..The Hp2 allele is thought to have spread under strong selection pressure, but it is unclear whether this is due to protection from malaria or other diseases...
Stable and unstable malaria hotspots in longitudinal cohort studies in KenyaPhilip Bejon
Kilifi KEMRI Wellcome Trust Collaborative Research Programme, Centre for Geographic Medicine Research Coast, Kilifi, Kenya
PLoS Med 7:e1000304. 2010..This heterogeneity reduces the efficacy of control strategies, but also implies that focusing control strategies on "hotspots" of transmission could be highly effective...
CISH and susceptibility to infectious diseasesChiea C Khor
The Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom
N Engl J Med 362:2092-101. 2010..The interleukin-2-mediated immune response is critical for host defense against infectious pathogens. Cytokine-inducible SRC homology 2 (SH2) domain protein (CISH), a suppressor of cytokine signaling, controls interleukin-2 signaling...
High mortality from Plasmodium falciparum malaria in children living with sickle cell anemia on the coast of KenyaCharlotte F McAuley
Centre for Geographic Medicine Research Coast, Kilifi, Kenya
Blood 116:1663-8. 2010..Meanwhile, our study confirms the importance of providing all children living with SCA in malaria-endemic areas with effective prophylaxis...
Malaria as a cause of morbidity and mortality in children with homozygous sickle cell disease on the coast of KenyaAlbert N Komba
Kenya Medical Research Institute Wellcome Trust Programme, Centre for Geographic Medicine Research Coast, Kilifi, Kenya
Clin Infect Dis 49:216-22. 2009..Nevertheless, few data are available that support this practice...
Defining clinical malaria: the specificity and incidence of endpoints from active and passive surveillance of children in rural KenyaAlly Olotu
Kenya Medical Research Institute Wellcome Trust Research Programme, Centre for Geographic Medicine Research, Kilifi, Kenya
PLoS ONE 5:e15569. 2010..Subjective and objective fevers are both used to define the endpoint, but have not been carefully compared, and the relative incidence of clinical malaria by active and passive case detection is unknown...
Sickle cell trait and the risk of Plasmodium falciparum malaria and other childhood diseasesThomas N Williams
Kenya Medical Research Institute Wellcome Trust Programme, Centre for Geographic Medicine Research, Coast, Kilifi District Hospital, Kilifi, Kenya
J Infect Dis 192:178-86. 2005..Nevertheless, >50 years after this hypothesis was first proposed, the epidemiological description of the relationships between HbAS, malaria, and other common causes of child mortality remains incomplete...
Acquisition of naturally occurring antibody responses to recombinant protein domains of Plasmodium falciparum erythrocyte membrane protein 1Claire L Mackintosh
Kenya Medical Research Institute Centre for Geographic Medicine Research Coast, Kilifi District Hospital, Kilifi, Kenya
Malar J 7:155. 2008..The precise target for these antibodies is unknown. The best characterized and most likely target is the erythrocyte surface-expressed variant protein family Plasmodium falciparum erythrocyte membrane protein 1 (PfEMP1)...
Homozygosity and risk of childhood death due to invasive bacterial diseaseEmily J Lyons
The Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK
BMC Med Genet 10:55. 2009..Consequently, we performed a case-control study of fatal invasive bacterial disease in Kenyan children using a genome-wide screen with microsatellite markers...
Haptoglobin HP2-2 genotype, alpha-thalassaemia and acute seizures in children living in a malaria-endemic areaRichard Idro
Centre for Geographic Medicine Research Coast, Kenya Medical Research Institute, Kilifi, Kenya
Epilepsy Res 81:114-8. 2008..We conclude that the HP2-2 polymorphism and deletions in alpha-globin gene are not risk factors for acute seizures in children. Future studies should examine other susceptibility genes...
Tumor necrosis factor and lymphotoxin-alpha polymorphisms and severe malaria in African populationsTaane G Clark
Wellcome Trust Centre for Human Genetics, University of Oxford, Nuffield Department of Medicine, John Radcliffe Hospital, Oxford, United Kingdom
J Infect Dis 199:569-75. 2009..Therefore, more-detailed mapping of variants across TNF/LTA genes and their flanking regions in the Gambian and allied populations may need to be undertaken to find any causal polymorphisms...
An immune basis for malaria protection by the sickle cell traitThomas N Williams
Kenya Medical Research Institute, Wellcome Trust Programme, Centre for Geographic Medicine Research, Coast, Kilifi District Hospital, Kilifi, Kenya
PLoS Med 2:e128. 2005....
Survival and haematological recovery of children with severe malaria transfused in accordance to WHO guidelines in Kilifi, KenyaSamuel O Akech
Centre for Geographic Medicine Research Coast, Kenya Medical Research Institute, Kilifi, Kenya
Malar J 7:256. 2008..Few studies have reported outcome and haematological recovery of children with severe malaria where transfusion practice complies with WHO recommendations...
Rotavirus genetic diversity, disease association, and temporal change in hospitalized rural Kenyan childrenD James Nokes
Kenya Medical Research Institute, Centre for Geographic Medicine Research Coast, Kilifi, Kenya
J Infect Dis 202:S180-6. 2010..Longitudinal surveillance of disease-causing strains is a prerequisite to intervention...
Sensitivity of hospital-based surveillance for severe disease: a geographic information system analysis of access to care in Kilifi district, KenyaJennifer C Moïsi
KEMRI Wellcome Trust Research Programme, Kilifi, Kenya
Bull World Health Organ 89:102-11. 2011..To explore the relationship between homestead distance to hospital and access to care and to estimate the sensitivity of hospital-based surveillance in Kilifi district, Kenya...
Both heterozygous and homozygous alpha+ thalassemias protect against severe and fatal Plasmodium falciparum malaria on the coast of KenyaThomas N Williams
Wellcome Trust Kenya Medical Research Institute KEMRI, Centre for Geographic Medicine Research, Kilifi, Kenya
Blood 106:368-71. 2005..Our study supports the conclusion that both heterozygotes and homozygotes enjoy a selective advantage against death from Plasmodium falciparum malaria...
An observational study of children with sickle cell disease in Kilifi, KenyaManish Sadarangani
Centre for Geographical Medicine Coast CGMRC, Kenya Medical Research Institute KEMRI, Kilifi, Kenya
Br J Haematol 146:675-82. 2009..The prevalence of malaria was lower than expected given the prevalence in the local community. This study provides valuable data regarding the clinical characteristics of children living with SCD in a rural setting in East Africa...
Association of the GNAS locus with severe malariaSarah Auburn
Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK
Hum Genet 124:499-506. 2008..88 (0.81-0.96), P = 0.005 and OR = 1.12 (1.03-1.20), P = 0.005]. The evidence presented here indicates that the influence of G-alpha-s on erythrocyte invasion efficacy may, indeed, alter individual susceptibility to disease...
Human red blood cell polymorphisms and malariaThomas N Williams
KEMRI Wellcome Trust Collaborative Programme, Kilifi, Kenya
Curr Opin Microbiol 9:388-94. 2006..The challenge for the future must be to translate such advances into fresh approaches to the prevention and treatment of malaria...
Common NFKBIL2 polymorphisms and susceptibility to pneumococcal disease: a genetic association studyStephen J Chapman
The Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK
Crit Care 14:R227. 2010..The possible role of genetic variation in the atypical NF-?B inhibitor I?B-R, encoded by NFKBIL2, in susceptibility to invasive pneumococcal disease has not, to our knowledge, previously been reported upon...
The global distribution of the Duffy blood groupRosalind E Howes
Spatial Ecology and Epidemiology Group, Tinbergen Building, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK
Nat Commun 2:266. 2011..vivax malaria parasite...
HIV infection, malnutrition, and invasive bacterial infection among children with severe malariaJames A Berkley
Centre for Geographic Medicine Research, Kilifi, Kenya
Clin Infect Dis 49:336-43. 2009..However, it is unclear whether their cooccurrence with falciparum parasitization and severe disease happens by chance or by association among children in areas where malaria is endemic...
A polymorphism of intercellular adhesion molecule-1 is associated with a reduced incidence of nonmalarial febrile illness in Kenyan childrenNeil E Jenkins
Kenya Medical Research Institute Wellcome Trust Programme, Centre for Geographic Medicine Research, Kilifi, Kenya
Clin Infect Dis 41:1817-9. 2005..We propose that ICAM-1(Kilifi) may be associated with reduced rates of tissue damage and of death due to sepsis...
Lactate levels in severe malarial anaemia are associated with haemozoin-containing neutrophils and low levels of IL-12Climent Casals-Pascual
Nuffield Department of Clinical Laboratory Sciences and National Blood Service Oxford Centre, Oxford, OX3 9DU, UK
Malar J 5:101. 2006....
Co-inheritance of alpha+-thalassaemia and sickle trait results in specific effects on haematological parametersSammy Wambua
Kenya Medical Research Institute/Wellcome Trust Programme, Centre for Geographic Medicine Research, Coast, PO Box 230, Kilifi District Hospital, Kilifi, Kenya
Br J Haematol 133:206-9. 2006..63 g/dl) than in HbAS children (0.25 g/dl). HbAS also ameliorated both the reduced mean cell volume and mean cell haemoglobin normally associated with the -alpha/-alpha genotype. Potential mechanisms and implications are discussed...
Characterization of a Plasmodium falciparum macrophage-migration inhibitory factor homologueDamien V Cordery
Centre for Clinical Vaccinology and Tropical Medicine, Nuffield Department of Clinical Medicine, University of Oxford, Churchill Hospital, Oxford, OX3 7LJ, UK
J Infect Dis 195:905-12. 2007..The identification of a parasite homologue of MIF raised the question of whether it affects monocyte function in a manner similar to its human counterpart...
Management of severe malaria in children: proposed guidelines for the United KingdomKathryn Maitland
Kenya Medical Research Institute/Wellcome Trust Programme, Centre for Geographic Medicine Research-Coast, PO Box 230, Kilifi, Kenya
BMJ 331:337-43. 2005
Specific receptor usage in Plasmodium falciparum cytoadherence is associated with disease outcomeLucy B Ochola
KEMRI Wellcome Trust Research Programme, Centre for Geographic Medicine Research, Kilifi, Kenya
PLoS ONE 6:e14741. 2011..Our results show that increased binding to CD36 is associated with uncomplicated malaria while ICAM-1 adhesion is raised in parasites from cerebral malaria cases...
B cell memory to 3 Plasmodium falciparum blood-stage antigens in a malaria-endemic areaJeffrey R Dorfman
Kenya Medical Research Institute, Wellcome Trust Research Laboratories, Kilifi, Kenya
J Infect Dis 191:1623-30. 2005....
Red blood cell defects and malariaThomas N Williams
KEMRI Wellcome Trust Collaborative Programme, P O Box 230, Kilifi, Kenya
Mol Biochem Parasitol 149:121-7. 2006..The challenge for the future must be to convert these advances into fresh approaches to the prevention and treatment of malaria...
Malaria and nutritional status in children living on the coast of KenyaAlice M Nyakeriga
KEMRI Wellcome Trust Program, Center for Geographic Medicine Research, Coast, Kilifi District Hospital, Kilifi, Kenya
Am J Clin Nutr 80:1604-10. 2004..The relation between malnutrition and malaria is controversial. On the one hand, malaria may cause malnutrition, whereas on the other hand, malnutrition itself may modulate susceptibility to the disease...
A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosisChiea C Khor
The Wellcome Trust Centre for Human Genetics, University of Oxford, UK
Nat Genet 39:523-8. 2007..6 x 10(-8)). We found that the Mal S180L variant attenuated TLR2 signal transduction...
Haemoglobinopathies and resistance to malariaDavid J Roberts
Nuffield Department of Clinical Laboratory Sciences and National Blood Service Oxford Centre, John Radcliffe Hospital, Oxford, UK
Redox Rep 8:304-10. 2003..More recently, the underlying mechanisms of protection have been examined. This short review summarizes these studies and where possible shows how the putative mechanisms of protection may be linked to redox processes...
Experiences with community engagement and informed consent in a genetic cohort study of severe childhood diseases in KenyaVicki M Marsh
Kenya Medical Research Institute KEMRI Wellcome Trust Research Programme, Kilifi, Kenya
BMC Med Ethics 11:13. 2010....
Falciparum malaria: current therapeutic challengesKathryn Maitland
The Centre for Geographic Medicine Research, Coast, KEMRI, Kilifi, Kenya
Curr Opin Infect Dis 17:405-12. 2004..We then review some recent literature regarding the pathological processes involved in the aetiology of severe malaria that may lead to improvements in the management of children with severe disease...
Incidence and clinical characteristics of group A rotavirus infections among children admitted to hospital in Kilifi, KenyaD James Nokes
Kenya Medical Research Institute, Centre for Geographic Medicine Research Coast, Kilifi, Kenya
PLoS Med 5:e153. 2008..The study objective was to accurately define the incidence and severity of group A rotavirus disease in a resource-poor setting necessary to make informed decisions on the need for vaccine prevention...
Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesisFrédéric B Piel
Spatial Ecology and Epidemiology Group, Tinbergen Building, Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK
Nat Commun 1:104. 2010..We find geographical support for the malaria hypothesis globally; the relationship is relatively strong in Africa but cannot be resolved in the Americas or in Asia...
The use of cryopreserved mature trophozoites in assessing antibody recognition of variant surface antigens of Plasmodium falciparum-infected erythrocytesSamson M Kinyanjui
Kenya Medical Research Institute, Centre for Geographic Medicine Research Coast, P.O. Box 230, Kilifi, Kenya
J Immunol Methods 288:9-18. 2004..The use of cryopreserved mature trophozoites could help to circumvent the problems associated with recovery of cryopreserved ring trophozoites...
