Charles Plessy

Summary

Affiliation: RIKEN Brain Science Institute
Country: Japan

Publications

  1. ncbi Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
    Charles Plessy
    RIKEN Yokohama Institute, Omics Science Center, Yokohama, Japan
    Nat Methods 7:528-34. 2010
  2. ncbi Tunable fractionation of nucleic acids
    Md Salimullah
    Functional Genomics Technology Team, Omics Science Center OSC, RIKEN Yokohama Institute, Kanagawa, Japan
    Biotechniques 47:1041-3. 2009
  3. ncbi A resource for transcriptomic analysis in the mouse brain
    Charles Plessy
    Functional Genomics Technology Team, Omics Science Center, RIKEN Yokohama Institute, Yokohama, Kanagawa, Japan
    PLoS ONE 3:e3012. 2008
  4. ncbi High-throughput verification of transcriptional starting sites by Deep-RACE
    Signe Olivarius
    Functional Genomics Technology Team, Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan
    Biotechniques 46:130-2. 2009
  5. ncbi NanoCAGE: a high-resolution technique to discover and interrogate cell transcriptomes
    Md Salimullah
    RIKEN Yokohama Institute, Omics Science Center, Yokohama City, Kanagawa, 230 0045, Japan
    Cold Spring Harb Protoc 2011:pdb.prot5559. 2011
  6. ncbi The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
    Harukazu Suzuki
    RIKEN Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan
    Nat Genet 41:553-62. 2009

Detail Information

Publications6

  1. ncbi Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
    Charles Plessy
    RIKEN Yokohama Institute, Omics Science Center, Yokohama, Japan
    Nat Methods 7:528-34. 2010
    ..Both of these methods allow further annotation-agnostic studies of the complex human transcriptome...
  2. ncbi Tunable fractionation of nucleic acids
    Md Salimullah
    Functional Genomics Technology Team, Omics Science Center OSC, RIKEN Yokohama Institute, Kanagawa, Japan
    Biotechniques 47:1041-3. 2009
    ..This method could also be applied to the fractionation of nucleic acids generated by other types of reactions...
  3. ncbi A resource for transcriptomic analysis in the mouse brain
    Charles Plessy
    Functional Genomics Technology Team, Omics Science Center, RIKEN Yokohama Institute, Yokohama, Kanagawa, Japan
    PLoS ONE 3:e3012. 2008
    ..Studies of sorted cells expressing the same transgene have shown that cell populations can be distinguished according to their transcriptional profile...
  4. ncbi High-throughput verification of transcriptional starting sites by Deep-RACE
    Signe Olivarius
    Functional Genomics Technology Team, Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan
    Biotechniques 46:130-2. 2009
    ..In comparison to the sequencing of RACE PCR products, our approach is more precise and more cost-effective even for batches as small as 17...
  5. ncbi NanoCAGE: a high-resolution technique to discover and interrogate cell transcriptomes
    Md Salimullah
    RIKEN Yokohama Institute, Omics Science Center, Yokohama City, Kanagawa, 230 0045, Japan
    Cold Spring Harb Protoc 2011:pdb.prot5559. 2011
    ..The libraries can be sequenced using an Illumina sequencer Genome Analyzer IIX [corrected] with a level of sensitivity 1000 times higher than CAGE...
  6. ncbi The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
    Harukazu Suzuki
    RIKEN Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan
    Nat Genet 41:553-62. 2009
    ....