Koji Doi

Summary

Affiliation: National Institute of Agrobiological Sciences
Country: Japan

Publications

  1. ncbi Development of a novel data mining tool to find cis-elements in rice gene promoter regions
    Koji Doi
    National Institute of Agrobiological Sciences, 2 1 2 Kannondai, Tsukuba, Ibaraki 305 8602, Japan
    BMC Plant Biol 8:20. 2008
  2. ncbi Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana
    Hisako Ooka
    Department of Molecular Genetics, National Institute of Agrobiological Sciences, 2-1-2 Kannon-dai, Tsukuba, Ibaraki 305-8602, Japan
    DNA Res 10:239-47. 2003
  3. ncbi Combining in silico mapping and arraying: an approach to identifying common candidate genes for submergence tolerance and resistance to bacterial leaf blight in rice
    Kameswara Rao Kottapalli
    Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305 8602, Japan
    Mol Cells 24:394-408. 2007
  4. ncbi Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray
    Kouji Satoh
    Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan
    PLoS ONE 2:e1235. 2007
  5. ncbi Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    Shoshi Kikuchi
    Department of Molecular Biology, National Institute of Agrobiological Sciences, 2 1 2 Kannon dai, Tsukuba, Ibaraki 305 8602, Japan
    Science 301:376-9. 2003
  6. ncbi Gene expression analysis of the murine model of amyotrophic lateral sclerosis: studies of the Leu126delTT mutation in SOD1
    Yasuyo Fukada
    Department of Neurology, Institute of Neurological Sciences, Faculty of Medicine, Tottori University, Yonago, 36 1 Nishi cho, Yonago, Japan
    Brain Res 1160:1-10. 2007

Collaborators

Detail Information

Publications6

  1. ncbi Development of a novel data mining tool to find cis-elements in rice gene promoter regions
    Koji Doi
    National Institute of Agrobiological Sciences, 2 1 2 Kannondai, Tsukuba, Ibaraki 305 8602, Japan
    BMC Plant Biol 8:20. 2008
    ....
  2. ncbi Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana
    Hisako Ooka
    Department of Molecular Genetics, National Institute of Agrobiological Sciences, 2-1-2 Kannon-dai, Tsukuba, Ibaraki 305-8602, Japan
    DNA Res 10:239-47. 2003
    ..We discuss the relationship between the structure and function of the NAC family proteins in light of our results and the published data. Our results will aid further functional analysis of NAC family genes...
  3. ncbi Combining in silico mapping and arraying: an approach to identifying common candidate genes for submergence tolerance and resistance to bacterial leaf blight in rice
    Kameswara Rao Kottapalli
    Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305 8602, Japan
    Mol Cells 24:394-408. 2007
    ..We also detected up-regulation of novel defense/stress-related genes including those encoding fumaryl aceto acetate (FAA) hydrolase, scramblase, and galactose oxidase, in response to the imposed stresses...
  4. ncbi Gene organization in rice revealed by full-length cDNA mapping and gene expression analysis through microarray
    Kouji Satoh
    Division of Genome and Biodiversity Research, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan
    PLoS ONE 2:e1235. 2007
    ....
  5. ncbi Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    Shoshi Kikuchi
    Department of Molecular Biology, National Institute of Agrobiological Sciences, 2 1 2 Kannon dai, Tsukuba, Ibaraki 305 8602, Japan
    Science 301:376-9. 2003
    ..Protein informatics analysis against the InterPro database revealed the existence of proteins presented in rice but not in Arabidopsis. Sixty-four percent of our cDNAs are homologous to Arabidopsis proteins...
  6. ncbi Gene expression analysis of the murine model of amyotrophic lateral sclerosis: studies of the Leu126delTT mutation in SOD1
    Yasuyo Fukada
    Department of Neurology, Institute of Neurological Sciences, Faculty of Medicine, Tottori University, Yonago, 36 1 Nishi cho, Yonago, Japan
    Brain Res 1160:1-10. 2007
    ..These four genes may be related to the pathogenesis of FALS, especially with regard to the progression of reactive astrocytes and the inflammatory response of microglial cells...