Takashi Abe

Summary

Affiliation: Nagahama Institute of Bio-Science and Technology
Country: Japan

Publications

  1. ncbi tRNADB-CE: tRNA gene database curated manually by experts
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama, Shiga, Japan
    Nucleic Acids Res 37:D163-8. 2009
  2. ncbi A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama shi, Shiga ken, Japan
    DNA Res 16:287-97. 2009
  3. ncbi tRNADB-CE 2011: tRNA gene database curated manually by experts
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama, Shiga 526 0829, Japan
    Nucleic Acids Res 39:D210-3. 2011
  4. ncbi A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries
    Hiroshi Uehara
    Nagahama Institute of Bio Science and Technology, Japan
    Genes Genet Syst 86:53-66. 2011

Collaborators

Detail Information

Publications4

  1. ncbi tRNADB-CE: tRNA gene database curated manually by experts
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama, Shiga, Japan
    Nucleic Acids Res 37:D163-8. 2009
    ..tRNADB-CE can be accessed freely at http://trna.nagahama-i-bio.ac.jp...
  2. ncbi A novel bioinformatics strategy for function prediction of poorly-characterized protein genes obtained from metagenome analyses
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama shi, Shiga ken, Japan
    DNA Res 16:287-97. 2009
    ..BLSOM was applied to predict functions of vast quantities of proteins derived from mixed genomes in environmental samples...
  3. ncbi tRNADB-CE 2011: tRNA gene database curated manually by experts
    Takashi Abe
    Nagahama Institute of Bio Science and Technology, Nagahama, Shiga 526 0829, Japan
    Nucleic Acids Res 39:D210-3. 2011
    ..g. genus-specific markers) by themselves and clarify microbial community structures of ecosystems in detail. tRNADB-CE can be accessed freely at http://trna.nagahama-i-bio.ac.jp...
  4. ncbi A novel bioinformatics strategy for searching industrially useful genome resources from metagenomic sequence libraries
    Hiroshi Uehara
    Nagahama Institute of Bio Science and Technology, Japan
    Genes Genet Syst 86:53-66. 2011
    ..Here, we have developed a strategy for clustering of metagenomic sequences according to phylotypes and genomes, by testing a gene set contributing to environment preservation...