M Masseroli

Summary

Affiliation: Politecnico di Milano
Country: Italy

Publications

  1. ncbi MicroGen: a MIAME compliant web system for microarray experiment information and workflow management
    Sarah Burgarella
    Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milan, Italy
    BMC Bioinformatics 6:S6. 2005
  2. ncbi Automatic quantification of liver fibrosis: design and validation of a new image analysis method: comparison with semi-quantitative indexes of fibrosis
    M Masseroli
    Department of Pathology, School of Medicine and University Hospital, University of Granada, Spain
    J Hepatol 32:453-64. 2000
  3. ncbi Argument-predicate distance as a filter for enhancing precision in extracting predications on the genetic etiology of disease
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, Milan, Italy
    BMC Bioinformatics 7:291. 2006
  4. ncbi He@lthCo-op: a web-based system to support distributed healthcare co-operative work
    Marco Masseroli
    Dipartimento di Bioingegneria, Politecnico di Milano, Piazza Leonardo da Vinci 32, Italy
    Comput Biol Med 36:109-27. 2006
  5. ncbi Inherited disorder phenotypes: controlled annotation and statistical analysis for knowledge mining from gene lists
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milan, Italy
    BMC Bioinformatics 6:S18. 2005
  6. ncbi Using Gene Ontology and genomic controlled vocabularies to analyze high-throughput gene lists: three tool comparison
    Marco Masseroli
    BioMedical Informatics Laboratory, Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, I 20133 Milano, Italy
    Comput Biol Med 36:731-47. 2006
  7. ncbi GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists
    Marco Masseroli
    BioMedical Informatics Laboratory, Bioengineering Department Politecnico di Milano, I 20133 Milano, Italy
    Nucleic Acids Res 33:W717-23. 2005
  8. ncbi GFINDer: Genome Function INtegrated Discoverer through dynamic annotation, statistical analysis, and mining
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, I 20133 Milano, Italy
    Nucleic Acids Res 32:W293-300. 2004
  9. ncbi Web architecture for the remote browsing and analysis of distributed medical images and data
    M Masseroli
    Dipartimento di Bioingegneria, Politecnico di Milano, 20133 Milano, Italy
    Stud Health Technol Inform 84:43-7. 2001
  10. ncbi GAAS: gene array analyzer software for management, analysis and visualization of gene expression data
    M Masseroli
    Bioengineering Department, Politecnico di Milano, I 20133 Milano, Italy
    Bioinformatics 19:774-5. 2003

Collaborators

Detail Information

Publications24

  1. ncbi MicroGen: a MIAME compliant web system for microarray experiment information and workflow management
    Sarah Burgarella
    Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milan, Italy
    BMC Bioinformatics 6:S6. 2005
    ..Furthermore, complete information describing all experimental steps must be orderly collected to allow subsequent correct interpretation of experimental results...
  2. ncbi Automatic quantification of liver fibrosis: design and validation of a new image analysis method: comparison with semi-quantitative indexes of fibrosis
    M Masseroli
    Department of Pathology, School of Medicine and University Hospital, University of Granada, Spain
    J Hepatol 32:453-64. 2000
    ....
  3. ncbi Argument-predicate distance as a filter for enhancing precision in extracting predications on the genetic etiology of disease
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, Milan, Italy
    BMC Bioinformatics 7:291. 2006
    ..We also applied this strategy to relations identified with co-occurrence processing. Finally, we exploited postprocessed SemGen predications to investigate the genetic basis of Parkinson's disease...
  4. ncbi He@lthCo-op: a web-based system to support distributed healthcare co-operative work
    Marco Masseroli
    Dipartimento di Bioingegneria, Politecnico di Milano, Piazza Leonardo da Vinci 32, Italy
    Comput Biol Med 36:109-27. 2006
    ..He@lthCo-op enables easily gathering, storing, and accessing patient clinical and personal data anytime and from anywhere an Internet connection is available...
  5. ncbi Inherited disorder phenotypes: controlled annotation and statistical analysis for knowledge mining from gene lists
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milan, Italy
    BMC Bioinformatics 6:S18. 2005
    ..bioinformatics.polimi.it/GFINDer/, a Web system we previously developed that dynamically aggregates functional annotations of user uploaded gene lists and allows performing their statistical analysis and mining...
  6. ncbi Using Gene Ontology and genomic controlled vocabularies to analyze high-throughput gene lists: three tool comparison
    Marco Masseroli
    BioMedical Informatics Laboratory, Bioengineering Department, Politecnico di Milano, Piazza Leonardo da Vinci 32, I 20133 Milano, Italy
    Comput Biol Med 36:731-47. 2006
    ....
  7. ncbi GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists
    Marco Masseroli
    BioMedical Informatics Laboratory, Bioengineering Department Politecnico di Milano, I 20133 Milano, Italy
    Nucleic Acids Res 33:W717-23. 2005
    ..GFINDer is available for non-profit use at http://www.bioinformatics.polimi.it/GFINDer/...
  8. ncbi GFINDer: Genome Function INtegrated Discoverer through dynamic annotation, statistical analysis, and mining
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, I 20133 Milano, Italy
    Nucleic Acids Res 32:W293-300. 2004
    ..GFINDer is available online at http://www.medinfopoli.polimi.it/GFINDer/...
  9. ncbi Web architecture for the remote browsing and analysis of distributed medical images and data
    M Masseroli
    Dipartimento di Bioingegneria, Politecnico di Milano, 20133 Milano, Italy
    Stud Health Technol Inform 84:43-7. 2001
    ..g. emergency, operating theaters, ward, or even outpatient clinics- the implemented prototype represents an important aid in providing more efficient diagnoses and medical treatments...
  10. ncbi GAAS: gene array analyzer software for management, analysis and visualization of gene expression data
    M Masseroli
    Bioengineering Department, Politecnico di Milano, I 20133 Milano, Italy
    Bioinformatics 19:774-5. 2003
    ..Results of expression profiles can be interactively navigated through graphical interfaces and stored into output databases...
  11. ncbi MyWEST: my Web Extraction Software Tool for effective mining of annotations from web-based databanks
    Marco Masseroli
    Bioengineering Department, Politecnico di Milano, I 20133 Milano, Italy
    Bioinformatics 20:3326-35. 2004
    ..Although some databanks provide batch retrieval of data via FTP, this requires expertise and resources for locally reimplementing the databank...
  12. ncbi Liver fibrosis assessment with semiquantitative indexes and image analysis quantification in sustained-responder and non-responder interferon-treated patients with chronic hepatitis C
    T Caballero
    Department of Pathology, School of Medicine and University Hospital, University of Granada, Spain
    J Hepatol 34:740-7. 2001
    ..We aimed to compare semiquantitative methods with a quantitative digital image analysis system to assess liver fibrosis in biopsies from patients with chronic hepatitis and different responses to interferon...
  13. ncbi A web-enabled database of human gene expression controlled annotations for gene list functional evaluation
    Mario Ceresa
    Dipartimento di Elettronica e Informazione, Politecnico di Milano, Milano, Italy
    Conf Proc IEEE Eng Med Biol Soc 2007:394-7. 2007
    ..Moreover, we developed new GFINDer modules that allow annotating human nucleotide sequences with the imported eVOC controlled information on their expression features in order to explore and statistically analyze them...
  14. ncbi Gene ontology application to genomic functional annotation, statistical analysis and knowledge mining
    Dario Martucci
    Dipartimento di Bioingegneria, Politecnico di Milano, Piazza Leonardo da Vinci 32, I-20133 Milano, Italy
    Stud Health Technol Inform 102:108-31. 2004
    ....
  15. ncbi X-PAT: a multiplatform patient referral data management system for small healthcare institution requirements
    Marco Masseroli
    Dipartimento di Bioingegneria, Politecnico di Milano, I 20133 Milan, Italy
    IEEE Trans Inf Technol Biomed 12:424-32. 2008
    ..Healthcare personnel can interface the X-PAT system, according to applied state-of-the-art privacy and security measures, through friendly and intuitive Web pages that facilitate user acceptance...
  16. ncbi A web application for managing data of cardiovascular risk patients
    Stefano Bonacina
    Bioeng Dept, Politecnico di Milano, Milan, Italy
    Conf Proc IEEE Eng Med Biol Soc 1:6324-7. 2006
    ..Such application is intended to be part of a home monitoring system to be used during the home physical training program of cardiovascular risk patients...
  17. ncbi Statistical analysis of genomic protein family and domain controlled annotations for functional investigation of classified gene lists
    Marco Masseroli
    Dipartimento di Elettronica e Informazione, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
    BMC Bioinformatics 8:S14. 2007
    ....
  18. ncbi Management and analysis of genomic functional and phenotypic controlled annotations to support biomedical investigation and practice
    Marco Masseroli
    BioMedical Informatics Laboratory, Dipartimento di Bioingegneria, Politecnico di Milano, 1 20133 Milan, Italy
    IEEE Trans Inf Technol Biomed 11:376-85. 2007
    ....
  19. ncbi BIRD: Bio-Image Referral Database. Design and implementation of a new web based and patient multimedia data focused system for effective medical diagnosis and therapy
    Francesco Pinciroli
    Dipartimento di Bioingegneria, Politecnico di Milano, Piazza Leonardo da Vinci 32, I-20133 Milan, Italy
    Stud Health Technol Inform 98:301-3. 2004
    ..The core server operation software has been developed in PHP Hypertext Preprocessor scripting language, which is very versatile and useful for crafting a dynamic Web environment...
  20. ncbi A 3D interactive multimodal viewer as data mining tool for the Visible Human Dataset color image histograms
    Stefano Bonacina
    Dipartimento di Bioingegneria, Politecnico di Milano, Piazza Leonardo da Vinci 32, I-20133 Milano, Italy
    Stud Health Technol Inform 98:28-30. 2004
    ..This is a potentially useful resource to many developers working on the VHD raw data, however it could be used in medical education...
  21. ncbi Extraction, integration and analysis of alternative splicing and protein structure distributed information
    Matteo D'Antonio
    IFOM IEO Campus, Via Adamello 16, Milan, Italy
    BMC Bioinformatics 10:S15. 2009
    ..Primary data from these databases have been integrated and analyzed using the Protein Identifier Cross-Reference, BLAST, CLUSTALW and FeatureMap3D software tools...
  22. ncbi Speak-eR: an audible web-based medical record for emergency patients
    Francesco Pinciroli
    Dipartimento di Bioingegneria, Piazza Leonardo da Vinci 32, I-20133 Milano, Italy
    Stud Health Technol Inform 106:93-106. 2004
    ..Audible medical record delivery may be considered as an effective enhancement to those datasets needed in emergencies...
  23. ncbi Searching for specific motifs in affinity capture in proteome analysis
    Marco Masseroli
    Department of Electronics and Informatics, Politecnico di Milano, 20133 Milano, Italy
    J Proteomics 72:791-802. 2009
    ..The unique general and specific capturing ability of two of these AA probes, Phe and Arg, is evaluated, discussed and put in perspective...
  24. ncbi Performance of combinatorial peptide libraries in capturing the low-abundance proteome of red blood cells. 2. Behavior of resins containing individual amino acids
    Angela Bachi
    San Raffaele Scientific Institute, 20132 Milano, Italy
    Anal Chem 80:3557-65. 2008
    ..This suggests a peculiar mechanism of interaction: upon formation of the ion pair, the linkage between the protein and the bait is stabilized by the hydrophobicity of the underlying chain (e.g., a butyl in the case of Lys)...