Research Topics
Genomes and Genes | Sanjeev GalandeSummaryAffiliation: National Centre for Cell Science Country: India Publications
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Publications
Chromatin (dis)organization and cancer: BUR-binding proteins as biomarkers for cancerSanjeev Galande
National Center for Cell Science, Ganeshkhind, Pune 411 007, India
Curr Cancer Drug Targets 2:157-90. 2002..Experimental strategies by which these proteins can be exploited as carcinoma-specific diagnostic markers and as targets for antineoplastic therapy are discussed...
The third dimension of gene regulation: organization of dynamic chromatin loopscape by SATB1Sanjeev Galande
National Centre for Cell Science, Ganeshkhind, Pune 411007, India
Curr Opin Genet Dev 17:408-14. 2007..At genome-wide level, SATB1 seems to play a role in organization of the transcriptionally poised chromatin...
Phosphorylation of SATB1, a global gene regulator, acts as a molecular switch regulating its transcriptional activity in vivoP Pavan Kumar
National Centre for Cell Science, Ganeshkhind, Pune 411007, India
Mol Cell 22:231-43. 2006....
Acetylation-dependent interaction of SATB1 and CtBP1 mediates transcriptional repression by SATB1Prabhat Kumar Purbey
National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411007, India
Mol Cell Biol 29:1321-37. 2009..Collectively, these results provide a mechanistic insight into the role of SATB1-CtBP1 interaction in the repression and derepression of SATB1 target genes during Wnt signaling in T cells...
SATB1-binding sequences and Alu-like motifs define a unique chromatin context in the vicinity of human immunodeficiency virus type 1 integration sitesPavan P Kumar
National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411007, India
J Virol 81:5617-27. 2007..We propose that definitive sequence features such as the Alu-like motifs and SATB1-binding sites provide a unique chromatin context in vivo which is preferentially targeted by the HIV-1 integration machinery...
PDZ domain-mediated dimerization and homeodomain-directed specificity are required for high-affinity DNA binding by SATB1Prabhat Kumar Purbey
National Centre for Cell Science, Ganeshkhind, Pune 411007, India
Nucleic Acids Res 36:2107-22. 2008..These studies provide mechanistic insights into the mode of DNA binding and its effect on the regulation of transcription by SATB1...
Global regulator SATB1 recruits beta-catenin and regulates T(H)2 differentiation in Wnt-dependent mannerDimple Notani
National Centre for Cell Science, Ganeshkhind, Pune, India
PLoS Biol 8:e1000296. 2010....
Functional interaction between PML and SATB1 regulates chromatin-loop architecture and transcription of the MHC class I locusPavan P Kumar
National Centre for Cell Science, Ganeshkhind, Pune 411007, India
Nat Cell Biol 9:45-56. 2007..Our studies identify PML and SATB1 as a regulatory complex that governs transcription by orchestrating dynamic chromatin-loop architecture...
Phosphorylation-dependent regulation of SATB1, the higher-order chromatin organizer and global gene regulatorDimple Notani
National Centre for Cell Science, Ganeshkhind, Maharashtra, India
Methods Mol Biol 647:317-35. 2010..Finally, we describe a functional assay to monitor the effect of phosphorylation on transcription activity of SATB1 in vivo using MAR-linked reporter assay, in the presence and absence of PKC inhibitors...
N-terminal PDZ-like domain of chromatin organizer SATB1 contributes towards its function as transcription regulatorDimple Notani
National Centre for Cell Science, Ganeshkhind, Pune 411 007, India
J Biosci 36:461-9. 2011..These studies clearly demonstrated the role of PDZ domain of SATB1 in global gene regulation presumably through its interaction with other cellular proteins...
Displacement of SATB1-bound histone deacetylase 1 corepressor by the human immunodeficiency virus type 1 transactivator induces expression of interleukin-2 and its receptor in T cellsP Pavan Kumar
National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411007, India
Mol Cell Biol 25:1620-33. 2005..These results suggest a novel mechanism by which HIV-1 Tat might overcome SATB1-mediated repression in T cells...
pC6-2/caspase-6 system to purify glutathione-S-transferase-free recombinant fusion proteins expressed in Escherichia coliPrabhat Kumar Purbey
National Centre for Cell Science, NCCS Complex, Ganeshkhind, Pune 411007, India
Nat Protoc 1:1820-7. 2006..Here, we describe the detailed protocol for purifying proteins using our pC6-2/caspase-6 expression and purification system. The cleavage by caspase-6 occurs in <30 min and the entire procedure can be completed in 2 d...
Studying histone modifications and their genomic functions by employing chromatin immunoprecipitation and immunoblottingRanveer S Jayani
National Centre for Cell Science, Ganeshkhind, Pune 411007, India
Methods Cell Biol 98:35-56. 2010..We also describe the protocol for immunoblot analysis of histones using antibodies against key histone modifications. This chapter will serve as a useful resource in the study of histones and their posttranslational modifications...
Association by guilt: identification of DLX5 as a target for MeCP2 provides a molecular link between genomic imprinting and Rett syndromeSharmila Bapat
National Centre for Cell Science, Ganeshkhind, Pune, India
Bioessays 27:676-80. 2005..This altered expression of Dlx5 through loss of silent chromatin loop formation provides a molecular mechanism underlying RTT and proposes a novel role for MeCP2 in chromatin organization and imprinting...
Modulation of signal transduction pathways in lymphocytes due to sub-lethal toxicity of chlorinated phenolAmita Limaye
National Centre for Cell Science, NCCS Complex, University of Pune Campus, Ganeshkhind, Pune, India
Toxicol Lett 179:23-8. 2008..We propose that PCP, a potent pollutant, imparts its cytotoxicity by evading the immune response by simultaneously affecting multiple signaling pathways in lymphocytes...
Stimulation of Tat-independent transcriptional processivity from the HIV-1 LTR promoter by matrix attachment regionsShravanti Rampalli
National Center for Cell Science, Pune University Campus, Ganeshkhind, Pune 411007, India
Nucleic Acids Res 31:3248-56. 2003....
GST fusion vector with caspase-6 cleavage site for removal of fusion tag during column purificationPrabhat Kumar Purbey
National Centre for Cell Science, Ganeshkhind, Pune, India
Biotechniques 38:360, 362, 364 passim. 2005
Direct interaction with and activation of p53 by SMAR1 retards cell-cycle progression at G2/M phase and delays tumor growth in miceRuchika Kaul
National Center for Cell Science, Pune University Campus, Pune, India
Int J Cancer 103:606-15. 2003..These data together suggest that SMAR1 is the only known MARBP that delays tumor progression via direct activation and interaction with tumor-suppressor p53...
