Jean F Fontaine

Summary

Country: Germany

Publications

  1. ncbi PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries
    Adriano Barbosa-Silva
    Computational Biology and Data Mining Group, Max Delbruck Center for Molecular Medicine, Robert Rössle Strasse, 10, D 13125, Berlin, Germany
    BMC Bioinformatics 12:435. 2011
  2. ncbi LAITOR--Literature Assistant for Identification of Terms co-Occurrences and Relationships
    Adriano Barbosa-Silva
    Max Delbruck Center for Molecular Medicine, Berlin, Germany
    BMC Bioinformatics 11:70. 2010
  3. ncbi MedlineRanker: flexible ranking of biomedical literature
    Jean Fred Fontaine
    Computational Biology and Data Mining Group, Max Delbruck Center for Molecular Medicine, Robert Rossle Strasse 10, D 13125, Berlin, Germany
    Nucleic Acids Res 37:W141-6. 2009
  4. ncbi QiSampler: evaluation of scoring schemes for high-throughput datasets using a repetitive sampling strategy on gold standards
    Jean F Fontaine
    Max Delbruck Center for Molecular Medicine, Robert Rossle Strasse 10, 13125 Berlin, Germany
    BMC Res Notes 4:57. 2011
  5. ncbi Génie: literature-based gene prioritization at multi genomic scale
    Jean Fred Fontaine
    Max Delbruck Center for Molecular Medicine, Robert Rossle Str 10, 13125 Berlin, Germany
    Nucleic Acids Res 39:W455-61. 2011

Detail Information

Publications5

  1. ncbi PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries
    Adriano Barbosa-Silva
    Computational Biology and Data Mining Group, Max Delbruck Center for Molecular Medicine, Robert Rössle Strasse, 10, D 13125, Berlin, Germany
    BMC Bioinformatics 12:435. 2011
    ..abstract:..
  2. ncbi LAITOR--Literature Assistant for Identification of Terms co-Occurrences and Relationships
    Adriano Barbosa-Silva
    Max Delbruck Center for Molecular Medicine, Berlin, Germany
    BMC Bioinformatics 11:70. 2010
    ..Therefore, the study of the current literature about a selected topic deposited in public databases, facilitates the generation of novel hypotheses associating a set of bioentities to a common context...
  3. ncbi MedlineRanker: flexible ranking of biomedical literature
    Jean Fred Fontaine
    Computational Biology and Data Mining Group, Max Delbruck Center for Molecular Medicine, Robert Rossle Strasse 10, D 13125, Berlin, Germany
    Nucleic Acids Res 37:W141-6. 2009
    ..We show that our tool can be highly accurate and that it is able to process millions of abstracts in a practical amount of time. MedlineRanker is free for use and is available at http://cbdm.mdc-berlin.de/tools/medlineranker...
  4. ncbi QiSampler: evaluation of scoring schemes for high-throughput datasets using a repetitive sampling strategy on gold standards
    Jean F Fontaine
    Max Delbruck Center for Molecular Medicine, Robert Rossle Strasse 10, 13125 Berlin, Germany
    BMC Res Notes 4:57. 2011
    ..abstract:..
  5. ncbi Génie: literature-based gene prioritization at multi genomic scale
    Jean Fred Fontaine
    Max Delbruck Center for Molecular Medicine, Robert Rossle Str 10, 13125 Berlin, Germany
    Nucleic Acids Res 39:W455-61. 2011
    ..Common run times below a minute, even when analyzing the human genome with hundreds of thousands of literature records, allows the use of Génie in routine lab work. Availability: http://cbdm.mdc-berlin.de/tools/genie/...