Anastassios C Papageorgiou

Summary

Affiliation: Turku Centre for Biotechnology
Country: Finland

Publications

  1. ncbi Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, Turku 20521, Finland
    J Mol Biol 382:1184-94. 2008
  2. ncbi The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode
    Sachin Wakadkar
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 66:648-54. 2010
  3. ncbi Magnetic properties and structural characterization of iron oxide nanoparticles formed by Streptococcus suis Dpr and four mutants
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Turku, Finland
    J Biol Inorg Chem 16:799-807. 2011
  4. ncbi Expression, purification and crystallization of Streptococcus dysgalactiae-derived mitogen
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku, Turku 20521, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 62:242-4. 2006
  5. ncbi Structural and functional insights into Erwinia carotovora L-asparaginase
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    FEBS J 275:4306-16. 2008
  6. ncbi Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core
    Anni Kauko
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, Turku, Finland
    J Mol Biol 364:97-109. 2006
  7. ncbi Structural basis of the zinc- and terbium-mediated inhibition of ferroxidase activity in Dps ferritin-like proteins
    Heli Havukainen
    Turku Centre for Biotechnology, University of Turku, Turku 20521, Finland
    Protein Sci 17:1513-21. 2008
  8. ncbi Structural characterization and biological implications of di-zinc binding in the ferroxidase center of Streptococcus pyogenes Dpr
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    Biochem Biophys Res Commun 398:361-5. 2010
  9. ncbi Crystal structure of Streptococcus dysgalactiae-derived mitogen reveals a zinc-binding site and alterations in TcR binding
    Susanna Saarinen
    Turku Center for Biotechnology, University of Turku and Abo Akademi University, PO Box 123, Tykistokatu 6, BioCity, Turku 20521, Finland
    J Mol Biol 373:1089-97. 2007
  10. ncbi Effect of pH on the structure and stability of Bacillus circulans ssp. alkalophilus phosphoserine aminotransferase: thermodynamic and crystallographic studies
    Evangelia G Kapetaniou
    Centre of Biotechnology, University of Turku, Turku, Finland
    Proteins 63:742-53. 2006

Collaborators

  • Arto T Pulliainen
  • Anatoly P Dubnovitsky
  • Dieter Jendrossek
  • Julya Krasotkina
  • Angelos Thanassoulas
  • Tohru Miyoshi-Akiyama
  • Jukka Westermarck
  • Raimond B G Ravelli
  • Kristian Weckström
  • K Ravi Acharya
  • Teemu Haikarainen
  • Sauli Haataja
  • Prathusha Dhavala
  • Jukka Finne
  • Sachin Wakadkar
  • Anni Kauko
  • Evangelia G Kapetaniou
  • Susanna Saarinen
  • Mika Hirvonen
  • Jiunn Jong Wu
  • Chih Cheng Tsou
  • George Nounesis
  • Wolfram Meyer-Klaucke
  • Heli Havukainen
  • Hidehito Kato
  • Takehiko Uchiyama
  • Jizi Zhao
  • Antoine Mialon
  • Linnea E K Wikman
  • Gayatri B Chavali
  • G Jawahar Swaminathan
  • Kerry Gordon
  • Matthew D Baker
  • Petriina Paturi
  • Philemon Stavros
  • Johan Lindén
  • Li Qing Zhang
  • Siska Hermawan
  • Duo Chuan Li
  • Christine Dubreuil
  • Annika Salminen
  • Tomohito Hayashi
  • Ryo Abe
  • Teruo Kirikae
  • Tohru Miyoshi Akiyama
  • Henrik Soderstrom
  • Klaus Elenius
  • Riku Koivusalo
  • Reinhard Braaz
  • Tim Holmström
  • Randall S Johnson
  • Nikolay N Sokolov
  • Matti Sankinen
  • Teemu T Junttila
  • Anastasia Kuchumova
  • Sakari Hietanen
  • Andrew D Luster
  • Guo fu Hu
  • Richard A Colvin
  • James W Fett
  • Sylva L U Schwager
  • Gabriele K Campanella
  • Edward D Sturrock
  • Daniel E Holloway
  • Robert Shapiro
  • Mario R W Ehlers
  • Karen A Olson
  • Pierre Redelinghuys
  • Ramanathan Natesh
  • Sarah White
  • Anni Penttinen
  • Michael A Kehoe
  • Bryan Lingard
  • John H Robinson
  • Kaarina Tikkanen
  • Jeong Jin Lee
  • Richard W Titball
  • David Cavanagh
  • Julie Miller

Detail Information

Publications34

  1. ncbi Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, Turku 20521, Finland
    J Mol Biol 382:1184-94. 2008
    ..funiculosum PHB depolymerase have adopted different strategies for effective substrate binding in response to their diverse substrate specificity and the lack of a substrate-binding domain...
  2. ncbi The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode
    Sachin Wakadkar
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 66:648-54. 2010
    ..The changes were located in surface loops involved in dimer formation, indicating some flexibility of these loops and their possible involvement in polyester binding...
  3. ncbi Magnetic properties and structural characterization of iron oxide nanoparticles formed by Streptococcus suis Dpr and four mutants
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Turku, Finland
    J Biol Inorg Chem 16:799-807. 2011
    ....
  4. ncbi Expression, purification and crystallization of Streptococcus dysgalactiae-derived mitogen
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku, Turku 20521, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 62:242-4. 2006
    ..The crystals belong to space group P3/P3(1)/P3(2), with unit-cell parameters a = b = 52.7, c = 62.4 A, gamma = 120 degrees and one molecule in the crystallographic asymmetric unit...
  5. ncbi Structural and functional insights into Erwinia carotovora L-asparaginase
    Anastassios C Papageorgiou
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    FEBS J 275:4306-16. 2008
    ..carotovora asparaginase has limited potential as an antileukemic drug, despite its promising low glutaminase activity. Our analysis may be applicable to the therapeutic evaluation of other asparaginases as well...
  6. ncbi Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core
    Anni Kauko
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, Turku, Finland
    J Mol Biol 364:97-109. 2006
    ..Characterization of the two iron cores in Dpr could provide insights into nucleation events and the mechanism of iron core growth in the Dps family of proteins...
  7. ncbi Structural basis of the zinc- and terbium-mediated inhibition of ferroxidase activity in Dps ferritin-like proteins
    Heli Havukainen
    Turku Centre for Biotechnology, University of Turku, Turku 20521, Finland
    Protein Sci 17:1513-21. 2008
    ....
  8. ncbi Structural characterization and biological implications of di-zinc binding in the ferroxidase center of Streptococcus pyogenes Dpr
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    Biochem Biophys Res Commun 398:361-5. 2010
    ..The results suggest a structural basis for the protection of Streptococcus pyogenes in zinc stress conditions and provide a clear evidence for a di-zinc and di-iron ferroxidase site in Streptococcus pyogenes Dpr protein...
  9. ncbi Crystal structure of Streptococcus dysgalactiae-derived mitogen reveals a zinc-binding site and alterations in TcR binding
    Susanna Saarinen
    Turku Center for Biotechnology, University of Turku and Abo Akademi University, PO Box 123, Tykistokatu 6, BioCity, Turku 20521, Finland
    J Mol Biol 373:1089-97. 2007
    ..This observation and the lack of the alpha5 helix suggest alterations in T-cell-receptor binding...
  10. ncbi Effect of pH on the structure and stability of Bacillus circulans ssp. alkalophilus phosphoserine aminotransferase: thermodynamic and crystallographic studies
    Evangelia G Kapetaniou
    Centre of Biotechnology, University of Turku, Turku, Finland
    Proteins 63:742-53. 2006
    ....
  11. ncbi Structural and thermodynamic characterization of metal ion binding in Streptococcus suis Dpr
    Teemu Haikarainen
    Turku Center for Biotechnology, University of Turku and Abo Akademi University, Turku 20521, Finland
    J Mol Biol 405:448-60. 2011
    ..The results presented here demonstrate the ability of SsDpr to bind various metals as substitutes for iron and will help in better understanding protein-metal interactions in the Dps family of proteins as potential metal nanocontainers...
  12. ncbi Dps/Dpr ferritin-like protein: insights into the mechanism of iron incorporation and evidence for a central role in cellular iron homeostasis in Streptococcus suis
    Arto T Pulliainen
    Department of Medical Biochemistry and Molecular Biology, University of Turku, Kiinamyllynkatu 10, FI 20520 Turku, Finland
    Mol Microbiol 57:1086-100. 2005
    ..The key residues responsible for iron incorporation in S. suis Dpr are well conserved throughout the Dps family. A model for the iron incorporation mechanism of the Dps/Dpr ferritin-like protein is proposed...
  13. ncbi Crystal structures of Streptococcus pyogenes Dpr reveal a dodecameric iron-binding protein with a ferroxidase site
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Turku, Finland
    J Biol Inorg Chem 15:183-94. 2010
    ..Although the N-terminal pore was found to be similar to that of other Dps-like proteins, the C-terminal pore was found to be blocked by bulky Tyr residues instead of small residues present in other Dps-like proteins...
  14. ncbi Structure of Helicobacter pylori L-asparaginase at 1.4 A resolution
    Prathusha Dhavala
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland
    Acta Crystallogr D Biol Crystallogr 65:1253-61. 2009
    ..coli L-asparaginase than to any other L-asparaginase, including Er. carotovora L-asparaginase, despite the fact that the latter is also characterized by low glutaminase activity...
  15. ncbi Enzyme adaptation to alkaline pH: atomic resolution (1.08 A) structure of phosphoserine aminotransferase from Bacillus alcalophilus
    Anatoly P Dubnovitsky
    Turku Centre for Biotechnology, University of Turku, Finland
    Protein Sci 14:97-110. 2005
    ..The identified structural features are proposed to be possible factors implicated in the alkaline adaptation of phosphoserine aminotransferase...
  16. ncbi Expression, purification and crystallization of Helicobacter pylori L-asparaginase
    Prathusha Dhavala
    Turku Centre for Biotechnology, University of Turku and Abo Akademi, Turku 20521, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 64:740-2. 2008
    ..Elucidation of the crystal structure will provide insight into the active site of the enzyme and a better understanding of the structure-activity relationship in L-asparaginases...
  17. ncbi Dps-like proteins: structural and functional insights into a versatile protein family
    Teemu Haikarainen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, P O Box 123, Turku, 20521, Finland
    Cell Mol Life Sci 67:341-51. 2010
    ..A better understanding of their function and mechanism could therefore lead to novel applications in biotechnology and nanotechnology...
  18. ncbi Crystal structure of Streptococcus suis Dps-like peroxide resistance protein Dpr: implications for iron incorporation
    Anni Kauko
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, BioCity, Turku 20521, Finland
    J Mol Biol 338:547-58. 2004
    ..The structure of Dpr presented here shows potential local conformational changes that may occur during iron incorporation. A role for the metal-binding site in iron uptake is proposed...
  19. ncbi Crystallization and preliminary crystallographic analysis of L-asparaginase from Erwinia carotovora
    Linnea E K Wikman
    Turku Centre for Biotechnology, University of Turku, Turku 20521, Finland
    Acta Crystallograph Sect F Struct Biol Cryst Commun 61:407-9. 2005
    ..A molecular-replacement solution has been found and refinement is currently in progress. The crystal structure may provide leads towards protein-engineering efforts aimed at safer asparaginase administration in leukaemia treatment...
  20. ncbi Crystallization and preliminary X-ray analysis of a novel thermoalkalophilic poly(3-hydroxybutyrate) depolymerase (PhaZ7) from Paucimonas lemoignei
    Evangelia G Kapetaniou
    Turku Centre for Biotechnology, University of Turku, , Turku 20521, Finland
    Acta Crystallograph Sect F Struct Biol Cryst Commun 61:479-81. 2005
    ..8, b = 46.5, c = 171.3, beta = 128.9 degrees. A complete data set was collected to 2.75 A resolution at 100 K using synchrotron radiation...
  21. ncbi Expression, purification and crystallization of Dpr, a ferritin-like protein from the Gram-positive meningitis-associated bacterium Streptococcus suis
    Sauli Haataja
    Department of Medical Biochemistry, University of Turku, Turku 20520, Finland
    Acta Crystallogr D Biol Crystallogr 58:1851-3. 2002
    ..3 A resolution was collected using synchrotron radiation. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 104.3, b = 137.6, c = 142.1 A and 12 molecules in the asymmetric unit...
  22. ncbi Crystal structure of a family 45 endoglucanase from Melanocarpus albomyces: mechanistic implications based on the free and cellobiose-bound forms
    Mika Hirvonen
    Turku Centre for Biotechnology, University of Turku, P.O. Box 123, Turku 20521, Finland
    J Mol Biol 329:403-10. 2003
    ..It is therefore proposed that these alterations may reflect differences in the binding mechanism and catalytic action of the enzyme...
  23. ncbi Expression, purification, crystallization and preliminary crystallographic analysis of phosphoserine aminotransferase from Bacillus alcalophilus
    Anatoly P Dubnovitsky
    Turku Centre for Biotechnology, University of Turku and Abo Academi University, PO Box 123, Turku 20521, Finland
    Acta Crystallogr D Biol Crystallogr 59:2319-21. 2003
    ..7 and 1.6 A resolution, respectively, at 100 K using synchrotron radiation. Analysis of the structure of B. alcalophilus PSAT may reveal structural features that contribute to enzyme adaptability at high pH values...
  24. ncbi Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage
    Anatoly P Dubnovitsky
    Turku Centre for Biotechnology, University of Turku, Finland
    Protein Sci 14:1498-507. 2005
    ..7 x 10(6) Ggamma. Our data provide new insights into the enzymatic activation of pyridoxal-5'-phosphate and suggest that special care should be taken while using macromolecular crystallography to study details in strained active sites...
  25. ncbi Expression, purification and crystallization of Chaetomium thermophilum Cu,Zn superoxide dismutase
    Sachin Wakadkar
    Turku Centre for Biotechnology, University of Turku and Abo Akademi, Turku 20521, Finland
    Acta Crystallogr Sect F Struct Biol Cryst Commun 66:1089-92. 2010
    ..Elucidation of the crystal structure will provide insights into the active site of the enzyme and a better understanding of the structure-activity relationship, assembly and thermal stability of Cu,ZnSODs...
  26. ncbi Lower consolute boundaries of the nonionic surfactant C8E5 in aqueous alkali halide solutions: an approach to reproduce the effects of alkali halides on the cloud-point temperature
    Kristian Weckström
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, P O Box 123, FIN 20521 Turku, Finland
    J Colloid Interface Sci 310:151-62. 2007
    ..In this approach use is made of the known behaviour of the electrolytes at the air/water surface and the virial expansion, to account for the initial salting-out/-in effect and the variation of the effect with electrolyte molality...
  27. ncbi Crystallization and preliminary crystallographic analysis of a family 45 endoglucanase from the thermophilic fungus Melanocarpus albomyces
    Mika Hirvonen
    Turku Centre for Biotechnology, University of Turku and Abo Akademi University, PO Box 123, Turku 20521, Finland
    Acta Crystallogr D Biol Crystallogr 58:336-8. 2002
    ..Preliminary crystallographic analysis showed that the crystals belong to the tetragonal space group P4(1)2(1)2/P4(3)2(1)2, with unit-cell parameters a = 47.3, b = 47.3, c = 177.3 A and one molecule per asymmetric unit...
  28. ncbi DNA topoisomerase I is a cofactor for c-Jun in the regulation of epidermal growth factor receptor expression and cancer cell proliferation
    Antoine Mialon
    Centre for Biotechnology, University of Turku and Abo Akademi University, Tykistökatu 6B, 20520 Turku, Finland
    Mol Cell Biol 25:5040-51. 2005
    ..In addition, the results of the present study strongly suggest that inhibition of EGFR expression is a novel mechanism by which topotecan inhibits cell proliferation in cancer therapy...
  29. ncbi Cloning, expression, and characterization of the superantigen streptococcal pyrogenic exotoxin G from Streptococcus dysgalactiae
    Jizi Zhao
    Department of Infectious Diseases, Research Institute, International Medical Center of Japan, 1 21 1 Toyama, Shinjuku ku, Tokyo 162 8655, Japan
    Infect Immun 75:1721-9. 2007
    ..Bovine serum showed reactivity to the rSPEGG proteins. These results indicated that SPEGGs have properties as superantigens, and it is likely that SPEGGs play a pathogenic role in animals...
  30. ncbi The crystal structure of human angiogenin in complex with an antitumor neutralizing antibody
    Gayatri B Chavali
    Department of Biology and Biochemistry, University of Bath, Claverton Down, BA2 7AY, Bath, United Kingdom
    Structure 11:875-85. 2003
    ..The ANG-Fab complex structure should be invaluable for designing maximally humanized versions of 26-2F for potential clinical use...
  31. ncbi Identification of a secondary zinc-binding site in staphylococcal enterotoxin C2. Implications for superantigen recognition
    Anastassios C Papageorgiou
    Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK
    J Biol Chem 279:1297-303. 2004
    ..SEC2.MHC complex are considered, and the possibility that zinc may regulate the activity of SEC2 as a toxin facilitating different T cell responses is discussed...
  32. ncbi Deglycosylation, processing and crystallization of human testis angiotensin-converting enzyme
    Kerry Gordon
    Division of Medical Biochemistry, Faculty of Health Sciences, University of Cape Town, Observatory 7925, South Africa
    Biochem J 371:437-42. 2003
    ..Thus underglycosylated human tACE mutants, lacking O-linked oligosaccharides and most N-linked oligosaccharides or with only simple N-linked oligosaccharides attached throughout the molecule, are suitable for X-ray diffraction studies...
  33. ncbi Crystal structures of oligomeric forms of the IP-10/CXCL10 chemokine
    G Jawahar Swaminathan
    Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, United Kingdom
    Structure 11:521-32. 2003
    ..We propose that the tetrameric structures may represent species promoted by the binding of glycosaminoglycans. The binding sites for several IP-10-neutralizing mAbs have also been mapped...
  34. ncbi Structural and functional role of threonine 112 in a superantigen Staphylococcus aureus enterotoxin B
    Matthew D Baker
    Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, United Kingdom
    J Biol Chem 277:2756-62. 2002
    ..We present a detailed comparison of the mutant structure determined at 2.0 A with the previously reported native SEB and SEB-TCR V(beta) complex structures...