Jose M Peregrin-Alvarez

Summary

Affiliation: The Hospital for Sick Children
Country: Canada

Publications

  1. ncbi The global landscape of sequence diversity
    José Manuel Peregrín-Alvarez
    Molecular Structure and Function, Hospital for Sick Children, 555 University Avenue, Toronto, ON M5G 1X8, Canada
    Genome Biol 8:R238. 2007
  2. ncbi The conservation and evolutionary modularity of metabolism
    Jose M Peregrin-Alvarez
    Program in Molecular Structure and Function, Hospital for Sick Children, College Street, Toronto, ON M5G1L7, Canada
    Genome Biol 10:R63. 2009
  3. ncbi The Modular Organization of Protein Interactions in Escherichia coli
    Jose M Peregrin-Alvarez
    Program in Molecular Structure and Function, Hospital for Sick Children, Toronto, Ontario, Canada
    PLoS Comput Biol 5:e1000523. 2009
  4. ncbi Bacteriome.org--an integrated protein interaction database for E. coli
    Chong Su
    Molecular Structure and Function, Hospital for Sick Children, 555 University Avenue, Toronto, ON M5G 1X8, Canada
    Nucleic Acids Res 36:D632-6. 2008
  5. ncbi Phylogenomic analysis of EST datasets
    Jose M Peregrin-Alvarez
    Molecular Structure and Function, Hospital for Sick Children, Toronto, Ontario, Canada
    Methods Mol Biol 533:257-76. 2009
  6. ncbi Inferring ancestral protein interaction networks
    Jose M Peregrin-Alvarez
    SickKids Research Institute, Toronto, Ontario, Canada
    Methods Mol Biol 452:417-30. 2008

Collaborators

  • John Parkinson
  • Chong Su
  • Vincent Fong
  • Andrew Emili
  • Gareth Butland
  • Sadhna Phanse

Detail Information

Publications6

  1. ncbi The global landscape of sequence diversity
    José Manuel Peregrín-Alvarez
    Molecular Structure and Function, Hospital for Sick Children, 555 University Avenue, Toronto, ON M5G 1X8, Canada
    Genome Biol 8:R238. 2007
    ....
  2. ncbi The conservation and evolutionary modularity of metabolism
    Jose M Peregrin-Alvarez
    Program in Molecular Structure and Function, Hospital for Sick Children, College Street, Toronto, ON M5G1L7, Canada
    Genome Biol 10:R63. 2009
    ..Here we supplement existing genome and protein resources with partial genome datasets derived from 193 eukaryotes to present a comprehensive survey of the conservation of metabolism across 26 taxa representing the three domains of life...
  3. ncbi The Modular Organization of Protein Interactions in Escherichia coli
    Jose M Peregrin-Alvarez
    Program in Molecular Structure and Function, Hospital for Sick Children, Toronto, Ontario, Canada
    PLoS Comput Biol 5:e1000523. 2009
    ..Together these data provide a global view of the modular organization of the E. coli proteome and yield unique insights into structural and evolutionary relationships in bacterial networks...
  4. ncbi Bacteriome.org--an integrated protein interaction database for E. coli
    Chong Su
    Molecular Structure and Function, Hospital for Sick Children, 555 University Avenue, Toronto, ON M5G 1X8, Canada
    Nucleic Acids Res 36:D632-6. 2008
    ..Bacteriome.org is available online at http://www.bacteriome.org...
  5. ncbi Phylogenomic analysis of EST datasets
    Jose M Peregrin-Alvarez
    Molecular Structure and Function, Hospital for Sick Children, Toronto, Ontario, Canada
    Methods Mol Biol 533:257-76. 2009
    ..The second focuses on the use of phylogenetic profiles to identify groups of taxonomically related sequences...
  6. ncbi Inferring ancestral protein interaction networks
    Jose M Peregrin-Alvarez
    SickKids Research Institute, Toronto, Ontario, Canada
    Methods Mol Biol 452:417-30. 2008
    ....