Berivan Baskin

Summary

Affiliation: The Hospital for Sick Children
Country: Canada

Publications

  1. ncbi Duchenne muscular dystrophy caused by a complex rearrangement between intron 43 of the DMD gene and chromosome 4
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada
    Neuromuscul Disord 21:178-82. 2011
  2. ncbi PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine
    Ian Donaldson
    Samuel Lunenfeld Research Institute, Toronto, M5G 1X5, Canada
    BMC Bioinformatics 4:11. 2003
  3. ncbi Becker muscular dystrophy caused by an intronic mutation reducing the efficiency of the splice donor site of intron 26 of the dystrophin gene
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, 555 University Avenue, Toronto, Ont, Canada
    Neuromuscul Disord 19:189-92. 2009
  4. ncbi Paternal isodisomy of chromosome 2 as a cause of long chain 3-hydroxyacyl-CoA dehydrogenase (LCHAD) deficiency
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada
    Am J Med Genet A 152:1808-11. 2010
  5. ncbi Monoallelic expression determines oncogenic progression and outcome in benign and malignant brain tumors
    Erin J Walker
    Division of Haematology Oncology, The Labatt Brain Tumor Research Centre, The Hospital for Sick Children, Toronto General Hospital, Toronto, Ontario, Canada
    Cancer Res 72:636-44. 2012
  6. ncbi TP53 alterations determine clinical subgroups and survival of patients with choroid plexus tumors
    Uri Tabori
    The Hospital for Sick Children, Division of Hematology Oncology, 555 University Ave, Toronto, Ontario, M5G 1X8, Canada
    J Clin Oncol 28:1995-2001. 2010
  7. ncbi Walker-Warburg Syndrome with POMT1 mutations can be associated with cleft lip and cleft palate
    Jiri Vajsar
    Division of Neurology, The Hospital for Sick Children, 555 University Avenue, Toronto, Ont, Canada M5G 1X8
    Neuromuscul Disord 18:675-7. 2008
  8. ncbi A common molecular mechanism underlies two phenotypically distinct 17p13.1 microdeletion syndromes
    Adam Shlien
    The Hospital for Sick Children, Toronto, ON, Canada
    Am J Hum Genet 87:631-42. 2010
  9. ncbi Milder phenotype of congenital muscular dystrophy in a novel POMT1 mutation
    Samiah A Al-Zaidy
    Neurology Division, Hospital for Sick Children, Toronto, Canada
    Muscle Nerve 45:752-5. 2012
  10. ncbi Recurrent focal copy-number changes and loss of heterozygosity implicate two noncoding RNAs and one tumor suppressor gene at chromosome 3q13.31 in osteosarcoma
    Ivan Pasic
    Institute of Medical Science, Department of Medical Biophysics, University of Toronto, and Program in Genetics and Genome Biology, Department of Pediatric Laboratory Medicine, Division of Hematology Oncology, The Hospital for Sick Children, Toronto, Ontario, Canada
    Cancer Res 70:160-71. 2010

Collaborators

Detail Information

Publications12

  1. ncbi Duchenne muscular dystrophy caused by a complex rearrangement between intron 43 of the DMD gene and chromosome 4
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada
    Neuromuscul Disord 21:178-82. 2011
    ....
  2. ncbi PreBIND and Textomy--mining the biomedical literature for protein-protein interactions using a support vector machine
    Ian Donaldson
    Samuel Lunenfeld Research Institute, Toronto, M5G 1X5, Canada
    BMC Bioinformatics 4:11. 2003
    ..We present an information extraction system that was designed to locate protein-protein interaction data in the literature and present these data to curators and the public for review and entry into BIND...
  3. ncbi Becker muscular dystrophy caused by an intronic mutation reducing the efficiency of the splice donor site of intron 26 of the dystrophin gene
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, 555 University Avenue, Toronto, Ont, Canada
    Neuromuscul Disord 19:189-92. 2009
    ..We highlight the importance of mRNA analysis for determination of pathogenicity in patients with ambiguous sequence variants in the DMD gene...
  4. ncbi Paternal isodisomy of chromosome 2 as a cause of long chain 3-hydroxyacyl-CoA dehydrogenase (LCHAD) deficiency
    Berivan Baskin
    Division of Molecular Genetics, Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada
    Am J Med Genet A 152:1808-11. 2010
    ..We highlight the importance of parental testing in cases of homozygosity in autosomal recessive disorders and its impact on genetic counseling of the family...
  5. ncbi Monoallelic expression determines oncogenic progression and outcome in benign and malignant brain tumors
    Erin J Walker
    Division of Haematology Oncology, The Labatt Brain Tumor Research Centre, The Hospital for Sick Children, Toronto General Hospital, Toronto, Ontario, Canada
    Cancer Res 72:636-44. 2012
    ..Further exploration of MAE at relevant genes may contribute to better understanding of tumor development and determine survival in brain tumor patients...
  6. ncbi TP53 alterations determine clinical subgroups and survival of patients with choroid plexus tumors
    Uri Tabori
    The Hospital for Sick Children, Division of Hematology Oncology, 555 University Ave, Toronto, Ontario, M5G 1X8, Canada
    J Clin Oncol 28:1995-2001. 2010
    ..CONCLUSION Patients with CPC who have low tumor TSV and absence of TP53 dysfunction have a favorable prognosis and can be successfully treated without radiation therapy...
  7. ncbi Walker-Warburg Syndrome with POMT1 mutations can be associated with cleft lip and cleft palate
    Jiri Vajsar
    Division of Neurology, The Hospital for Sick Children, 555 University Avenue, Toronto, Ont, Canada M5G 1X8
    Neuromuscul Disord 18:675-7. 2008
    ..We recommend POMT1 analysis in WWS cases associated with cleft lip and palate when considering which gene to sequence first...
  8. ncbi A common molecular mechanism underlies two phenotypically distinct 17p13.1 microdeletion syndromes
    Adam Shlien
    The Hospital for Sick Children, Toronto, ON, Canada
    Am J Hum Genet 87:631-42. 2010
    ..Future studies should consider whether other loci in the genome also give rise to phenotypically distinct disorders by means of a common mechanism, resulting in a similar formation signature...
  9. ncbi Milder phenotype of congenital muscular dystrophy in a novel POMT1 mutation
    Samiah A Al-Zaidy
    Neurology Division, Hospital for Sick Children, Toronto, Canada
    Muscle Nerve 45:752-5. 2012
    ..Congenital muscular dystrophies (CMD) with hypoglycosylated ?-dystroglycan due to POMT1 mutations are associated with clinical phenotypes that vary in severity...
  10. ncbi Recurrent focal copy-number changes and loss of heterozygosity implicate two noncoding RNAs and one tumor suppressor gene at chromosome 3q13.31 in osteosarcoma
    Ivan Pasic
    Institute of Medical Science, Department of Medical Biophysics, University of Toronto, and Program in Genetics and Genome Biology, Department of Pediatric Laboratory Medicine, Division of Hematology Oncology, The Hospital for Sick Children, Toronto, Ontario, Canada
    Cancer Res 70:160-71. 2010
    ..Moreover, genetic deletions of LOC285194 or BC040587 were also associated with poor survival of osteosarcoma patients. Our findings identify osteo3q13.31 as a novel region of cooperatively acting tumor suppressor genes...
  11. ncbi Universal poor survival in children with medulloblastoma harboring somatic TP53 mutations
    Uri Tabori
    Divisions of Haematology Oncology, The LabattBrain Tumor Research Centre, TheHospital for Sick Children, Toronto, Ontario, Canada
    J Clin Oncol 28:1345-50. 2010
    ....
  12. ncbi Molecular diagnosis of 22q11.2 deletion and duplication by multiplex ligation dependent probe amplification
    Andrea C Stachon
    Institute of Medical Science, University of Toronto, Toronto, Canada
    Am J Med Genet A 143:2924-30. 2007
    ..Additional advantages of MLPA testing in our study included determination of deletion length and detection of 22q11.2 duplications. (c) 2007 Wiley-Liss, Inc...